The Central Highlands of Vietnam is the biggest Robusta coffee (Coffea canephora Pierre ex A.Froehner) growing region in the world. This study aims to identify the most important climatic variables that determine the current distribution of coffee in the Central Highlands and build a “coffee suitability” model to assess changes in this distribution due to climate change scenarios. A suitability model based on neural networks was trained on coffee occurrence data derived from national statistics on coffee-growing areas. Bias-corrected regional climate models were used for two climate change scenarios (RCP8.5 and RCP2.6) to assess changes in suitability for three future time periods (i.e., 2038-2048, 2059-2069, 2060-2070) relative to the 2009-2019 baseline. Average expected losses in suitable areas were 62% and 27% for RCP8.5 and RCP2.6, respectively. The loss in suitability due to RCP8.5 is particularly pronounced after 2060. Increasing mean minimum temperature during harvest (October-November) and growing season (March-September) and decreasing precipitation during late growing season (July-September) mainly determined the loss in suitable areas. If the policy commitments made at the Paris agreement are met, the loss in coffee suitability could potentially be compensated by climate change adaptation measures such as making use of shade trees and adapted clones.
Process-based land surface models are important tools for estimating global wetland methane (CH4) emissions and projecting their behavior across space and time. So far there are no performance assessments of model responses to drivers at multiple time scales. In this study, we apply wavelet analysis to identify the dominant time scales contributing to model uncertainty in the frequency domain. We evaluate seven wetland models at 23 eddy covariance tower sites. Our study first characterizes site-level patterns of freshwater wetland CH4 fluxes (FCH4) at different time scales. A Monte Carlo approach has been developed to incorporate flux observation error to avoid misidentification of the time scales that dominate model error. Our results suggest that 1) significant model-observation disagreements are mainly at short- to intermediate time scales (< 15 days); 2) most of the models can capture the CH4 variability at long time scales (> 32 days) for the boreal and Arctic tundra wetland sites but have limited performance for temperate and tropical/subtropical sites; 3) model error approximates pink noise patterns, indicating that biases at short time scales (< 5 days) could contribute to persistent systematic biases on longer time scales; and 4) differences in error pattern are related to model structure (e.g. proxy of CH4 production). Our evaluation suggests the need to accurately replicate FCH4 variability in future wetland CH4 model developments.
To integrate temporal and spatial dimensions of seasonal cycles, we combine two conceptual frameworks: ecological calendars and the “3Hs” model of the biocultural ethic. The latter values the vital links between human and other-than-human co-inhabitants, their life habits (e.g., cultural practices of human communities or life cycles of other-than-human species) and the structure, patterns and processes of their shared habitats. This integration enhances an understanding of core links between cultural practices and the life cycles of biocultural keystone species. As a synthesis, we use the term biocultural calendars to emphasize the co-constitutive nature of calendars that result from continuous interactions between dynamic biophysical and cultural processes. We apply biocultural calendars to examine cultural practices and socio-environmental changes in southwestern South America, specifically in Chile, spanning from (1) Cape Horn at the southern of the Americas in sub-Antarctic habitats inhabited by the Yagan indigenous community, (2) artisanal fisher communities in Chiloe; archipelagoes, (3) coastal regions of central-southern Chile inhabited by Lafkenche and Williche indigenous communities, to (4) high Andean habitats in northern Chile co-inhabited by Aymara communities along with domesticated camelids and a rich biodiversity. To illustrate biocultural calendars, we designed analemma diagrams that show the position of the Sun in the sky as seen from a fixed time and location, and linked to continuous renewal of astronomical, biological and cultural, seasonal cycles that sustain life. These biocultural calendars enhance the integration of indigenous and scientific knowledge to confront complex challenges of climate change faced by local communities and global society.
Urban flooding is caused due to poor drainage design, extreme weather, and excessive rain. Such flooding severely affects the road infrastructure. While there are a number of hydrologic software (e.g., TR-55, HydroCAD, TR-20, HEC-RAS, StreamStats, L-THIA, SWMM, WMOST, MAST, HY-8) available to examine extent of urban flooding, the softwares primarily require walking through a series of manual steps and address each study area individually preventing a collective view of an urban area in an efficient manner for hydrologic analysis. Furthermore, the softwares have no ability to recommend optimal culver pipe sizes to minimize flooding. In this paper, we develop a non-linear optimization formulation to minimize urban flooding using underdrain pipe size as a decision variable. We propose a solution algorithm in an integrated GIS and Python environment. Monte Carlo Simulation is used to simulate rainfall intensity by using empirical data on extreme weather from the National Oceanic and Atmospheric Administration. An example using the storm-drain system for the Baltimore County is performed. The results show that the model is effective in identifying storm-drain deficiencies and correcting them by choosing appropriate storm-drain inlet types to minimize flooding. The proposed method eliminates the need to examine each study area manually using existing hydrologic tools. Future works may include expanding the methodology for large datasets. They may also include a more sophisticated modeling approach for estimating rainfall intensity based on extreme weather patterns.
Vegetation acts as a critical link between the geosphere, biosphere, and atmosphere, regulating the flux of water to the atmosphere via transpiration (E) and the input of carbon from the atmosphere to plants and soil via photosynthetic carbon assimilation (A). The rate of A is known to be seasonally dynamic, however, few studies have investigated how the ratio between E and A, known as the water use efficiency (WUE), changes with phenology. WUE directly impacts regional to global carbon and water cycles and lack of knowledge regarding the dynamics of WUE remains among the largest uncertainties in current earth system model (ESM) projections of carbon and water exchange in temperate forests. Here we attempt to reduce this knowledge gap by studying these dynamics across a range of eight deciduous tree species common to temperate forests of North America. Using gas exchange and spectroscopic measurements, we investigated seasonal patterns in leaf level physiological, biochemical, and anatomical properties, including the seasonal progress of WUE and foliar capacity for carbon assimilation, which corollate with seasonal leaf phenology. We incorporate these findings into a modeling framework that contains the same representation of A, E, and canopy scaling found in ESMs to explore the impact of parameterization, which tracks phenological status, on model forecasts. Our results indicate that both photosynthetic capacity and WUE are seasonally dynamic processes which are not synchronized. WUE increased from a minimum at leaf out toward a more conservative behavior at the mid-summer growth peak. This pattern was explained by a decreased stomatal aperture and a decrease in cuticular leakage with leaf aging. We also observed a seasonal increase in maximum carboxylation capacity, with maximum rates of A and modeled tree net primary productivity (NPP) occurring later toward the end of the summer. This change was primarily driven by an increase in foliar nitrogen content, and a shift in the ratio of Vcmax to Jmax between expanding and mature leaves. By applying our revised parameterization, which captures seasonal dynamics of gas exchange, into our model framework we aim to improve the process representation of leaf function in a temperate forest, and more faithfully represent dynamics of NPP and E in the early and late growth season.
[This presentation is published at https://doi.org/10.1111/1440-1703.12317] Dead organic matter (DOM), which consists of leaf litter, fine woody debris (FWD; < 3 cm diameter), downed coarse woody debris (CWDlog), and standing or suspended coarse woody debris (CWDsnag), plays a crucial role in forest carbon cycling. However, the contributions of each DOM type on stand-scale carbon storage (necromass) and stand-scale CO2 efflux (Rstand) estimates are not well understood. In addition, there is little knowledge of the effect of each DOM type on the accuracy of stand-scale estimates of total necromass and Rstand. This study investigated characteristics of necromass and Rstand from DOM in a subtropical forest in Okinawa island, Japan, to quantify the effect of each DOM type on total necromass, total Rstand, and estimate error of total necromass and Rstand. The CWDsnag accounted for the highest proportion (54%) of total necromass (1499.7 g C m–2), followed by CWDlog (24%), FWD (11%), and leaf litter (11%). Leaf litter accounted for the highest proportion (37%) of total Rstand (340.6 g C m–2 yr–1), followed by CWDsnag (25%), CWDlog (20%), and FWD (17%). The CWDsnag was distributed locally with 173% of the coefficient of variation for necromass, which was approximately two times higher than those of leaf litter and FWD (72–73%). Our spatial analysis revealed, for accurate estimates of CWDsnag and CWDlog necromass, sampling areas of ≥ 28750 m2 and ≥ 2058‒42875 m2 were required, respectively, under the condition of 95% confidence level and 0.1 of accepted error. In summary, CWD considerably contributed to stand-scale carbon storage and efflux in this subtropical forest, resulting in a major source of errors in the stand-scale estimates. In forests where frequent tree death is likely to occur, necromass and Rstand of CWD are not negligible in considering the carbon cycling as in this study, and therefore need to be estimated accurately.
Because of its responsiveness to changes in the marine environment, it has been suggested by Rose in 2005 that the capelin, a small pelagic fish that is key to the ecology and fisheries of the North Atlantic, could be seen as a "canary in the coalmine" to detect signals of changes in the Arctic and sub-Arctic Ocean. We describe the historical data that make possible a quantitative assessment of the geographical shift capelin migration-paths and spawning grounds undergo, with increasing temperature, and the time it takes to make these shifts long-lasting. Then we introduce recent data that make these quantitative measurements more accurate and predictive. Direct measurements made in the fall expeditions of Iceland's Marine and Freshwater Research Institute along the East Coast of Greenland, and the Copernicus database of the European Union, are used to examine the evolution of the returning Atlantic water (from Svalbard) that is forming a warmer and saltier boundary current under the colder and fresher East Greenland polar current. The returning Atlantic water has a temperature range (1 to 4 degrees Centigrade) suitable for feeding migrations of the capelin. This current is reaching further north along the coast of North East Greenland and we use simulated data from Copernicus to monitor this evolution. We calibrate the Copernicus data with the direct measurements made by the Marine and Freshwater Research Institute, in Iceland. A trend emerges, both in the direct measurements and in Copernicus data, showing that the returning Atlantic water boundary current may reach Greenland's major Northeastern glacier streams, draining the bulk of the Greenland Glacier in the relatively near future We use the capelin data to predict when this may happen.
Canada’s boreal forests and tundra ecosystems are responding to unprecedented climate change with implications for the global carbon (C) cycle and global climate. However, our ability to model the response of Canada’s terrestrial ecosystems to climate change is limited and there has been no comprehensive, process-based assessment of Canada’s terrestrial C cycle. We tailor the Canadian Land Surface Scheme Including Biogeochemical Cycles (CLASSIC) to Canada and evaluate its C cycling performance against independent reference data. We utilize skill scores to assess model performance against reference data alongside benchmark scores that quantify the level of agreement between the reference data sets to aid in interpretation. Our results demonstrate CLASSIC’s sensitivity to prescribed vegetation cover. They also show that the addition of five region-specific PFTs improves CLASSIC’s skill at simulating the Canadian C cycle. CLASSIC performs well when tailored to Canada, falls within the range of the reference data sets, and meets or exceeds the benchmark scores for most C cycling processes. New region-specific land cover products, well-informed plant functional type (PFT) parameterizations, and more detailed reference data sets will facilitate improvements to the representation of the terrestrial C cycle in regional and global land surface models (LSMs). Incorporating a parameterization for boreal disturbance processes and explicitly representing peatlands and permafrost soils will improve CLASSIC’s future performance in Canada and other boreal regions. This is an important step toward a comprehensive process-based assessment of Canada’s terrestrial C cycle and evaluating Canada’s net C balance under climate change.
Antarctic landfast sea ice (fast ice) is stationary sea ice that is attached to the coast, grounded icebergs, ice shelves, or other protrusions on the continental shelf. Fast ice forms in narrow (generally up to 200 km wide) bands, and ranges in thickness from centimeters to tens of meters. In most regions, it forms in autumn, persists through the winter and melts in spring/summer, but can remain throughout the summer in particular locations. Despite its relatively limited horizontal extent (comprising between about 4 and 13 \% of overall sea ice), its presence, variability and seasonality are drivers of a wide range of physical, biological and biogeochemical processes, with both local and far-ranging ramifications for various Earth systems. Antarctic fast ice has, until quite recently, been overlooked in studies, likely due to insufficient knowledge of its distribution, leading to its reputation as a “missing piece of the Antarctic puzzle”. This review presents a synthesis of current knowledge of the physical, biogeochemical and biological aspects of fast ice, based on the sub-domains of: fast ice growth, properties and seasonality; remote-sensing and distribution; interactions with the atmosphere and the ocean; biogeochemical interactions; its role in primary production; and fast ice as a habitat for grazers. Finally, we consider the potential state of Antarctic fast ice at the end of the 21st Century, underpinned by Coupled Model Intercomparison Project model projections. This review also gives recommendations for targeted future work to increase our understanding of this critically-important element of the global cryosphere.
Stream confluences are ubiquitous interfaces in freshwater networks and serve as junctions of previously independent landscapes. However, few studies have investigated how confluences influence transport, mixing, and fate of organic matter and inorganic nutrients at the scale of river networks. To understand how network biogeochemical fluxes may be altered by confluences, we conducted two sampling campaigns at five confluences in summer and fall 2021 spanning the extent of a mixed land use stream network. We sampled the confluence mainstem and tributary reaches as well as throughout the mixing zone downstream. We predicted that biologically reactive solutes would mix non-conservatively downstream of confluences and that alterations to downstream biogeochemistry would be driven by differences in chemistry and size of the tributary and upstream reaches. In our study, confluences were geomorphically distinct downstream compared to reaches upstream of the confluence. Dissolved organic matter and nutrients mixed non-conservatively downstream of the five confluences. Biogeochemical patterns downstream of confluences were only partially explained by contributing reach chemistry and drainage area. We found that the relationship between geomorphic variability, water residence time, and microbial respiration differed between reaches upstream and downstream of confluences. The lack of explanatory power from network-scale drivers suggests that non-conservative mixing downstream of confluences may be driven by biogeochemical processes within the confluence mixing zone. The unique geomorphology, non-conservative biogeochemistry, and ubiquity of confluences highlights a need to account for the distinct functional role of confluences in water resource management in freshwater networks.
Detection and monitoring of tropical forest degradation is crucial to climate change mitigation and biodiversity conservation efforts. Several algorithms have been recently developed to monitor forest degradation and disturbance using remote sensing. However, these algorithms differ in local predictions due to the variation in the biogeophysical parameters used as degradation proxies. It is crucial to assess their relative performance and shortcomings in order to develop a clear understanding of the conditions under which each algorithm will detect a disturbance. In this study, we used GEDI lidar data on forest structure to examine the sensitivity of widely used forest disturbance and degradation products in a frontier tropical forest landscape in the Peruvian Amazon. We compared a leading spectral-based degradation algorithm (Continuous Degradation Detection (CODED)) with a radar-based algorithm (ALOS-2 PalSAR-2 based Radar Forest degradation Index (RFDI)). Given the sensitivity of radar to canopy cover and volume, we hypothesized that a single radar observation may detect degradation better than a long spectral time series. We first identified stable forests for reference structure in two ways: using disturbance stratification data from CODED, and using Peruvian protected areas. Our analysis showed that CODED performed below expectations in detecting forest degradation, often including patches that were regrowing after clear-felling in its “degraded” class. As CODED classified spectral changes over time rather than capturing structural variability, it classified 82% of palm plantations area as “degraded.” CODED also failed to detect degradation in forest areas that were likely partially disturbed (i.e., with low height and high cover). By contrast, the PalSAR-2 RFDI showed a significant relationship with forest height (detecting low height in degraded forests), although its predictive ability was limited due to high variability and signal saturation. Our study supports the conclusion that radar-based observation can detect forest degradation that the time series observation failed to detect. Given the limited correspondence between radar and spectral algorithms, we suggest that integrations of spectral and radar data may be beneficial for mapping forest degradation.
The biogeochemical cycles of iron (Fe) and manganese (Mn) in lakes and reservoirs have predictable seasonal trends, largely governed by stratification dynamics and redox conditions in the hypolimnion. However, short-term (i.e., sub-weekly) trends in Fe and Mn cycling are less well-understood, as most monitoring efforts focus on longer-term (i.e., monthly to yearly) time scales. The potential for elevated Fe and Mn to degrade water quality and impact ecosystem functioning, coupled with increasing evidence for high spatiotemporal variability in other biogeochemical cycles, necessitates a closer evaluation of the short-term Fe and Mn cycling dynamics in lakes and reservoirs. We adapted a UV-visible spectrophotometer coupled with a multiplexor pumping system and PLSR modeling to generate high spatiotemporal resolution predictions of Fe and Mn concentrations in a drinking water reservoir (Falling Creek Reservoir, Vinton, VA, USA) equipped with a hypolimnetic oxygenation (HOx) system. We quantified hourly Fe and Mn concentrations during two distinct transitional periods: reservoir turnover (Fall 2020) and initiation of the HOx system (Summer 2021). Our sensor system was able to successfully predict mean Fe and Mn concentrations as well as capture sub-weekly variability, ground-truthed by traditional grab sampling and laboratory analysis. During fall turnover, hypolimnetic Fe and Mn concentrations began to decrease more than two weeks before complete mixing of the reservoir occurred, with rapid equalization of epilimnetic and hypolimnetic Fe and Mn concentrations in less than 48 hours after full water column mixing. During the initiation of hypolimnetic oxygenation in Summer 2021, we observed that Fe and Mn were similarly affected by physical mixing in the hypolimnion, but displayed distinctly different responses to oxygenation, as indicated by the rapid oxidation of soluble Fe but not soluble Mn. This study demonstrates that Fe and Mn concentrations are highly sensitive to shifting DO and stratification and that their dynamics can substantially change on hourly to daily time scales in response to these transitions.
The end-Permian mass extinction event resulted in the loss of approximately 80% to 90% of marine animal species due to drastic changes in climate. Because warming was a major factor in the extinction, it has been theorized the organisms that did survive were able to do so because they moved to higher latitudes and this hypothesis is consistent with tetrapod data. We hypothesized that this relationship holds true for marine mollusks and arthropods as well. Using Changhsingian (Late Permian) and Induan (Early Triassic) data from the Paleobiology Database, we extracted occurrences of classes Bivalvia, Cephalopoda, Gastropoda, and Ostracoda, which had 2433, 395, 379, and 1717 genus occurrences, respectively. Then, we used the paleolatitude data for each genus occurrence to characterize the latitude distribution of each class before and after the Permian/Triassic transition. We compared the paleolatitude medians before and after the mass extinction for each class to quantify the latitude shift for each class: 23.18° for Bivalvia, 37.45° for Cephalopoda, 29.82° for Gastropoda, and 6.29° for Ostracoda. This finding indicates that each individual class had a different latitudinal shift, with all classes exhibiting a poleward shift north. We also conducted Welch t-tests to compare the differences in latitudinal ranges and found that they were significant (Bivalvia: p < 2.2e-16, Cephalopoda: p = 3.83e-6, Gastropoda: p < 2.2e-16, Ostracoda: p = 0.0030). In addition, we ran multiple randomized models to compare them with our original results and found a significant difference between them via the Kolmogorov-Smirnov test, which means that the northward migration could be a biological response. Moreover, the results of our study show that the overall latitudinal range of most classes contracted after the extinction event, with the exception of the Cephalopoda class.
Permafrost-affected ecosystems are prone to warming and thawing, which can increase the availability of subsurface nitrogen (N) with consequences for otherwise N-limited tundra vegetation. Here, we show that the upper permafrost of the Tibetan Plateau is subject to thawing and that the upper permafrost zone is rich in ammonium. Furthermore, a five-year 15N tracer experiment showed that long-rooted plant species were able to utilize 15N-labeled N at the permafrost table and far below the main root zone. A 20 years survey is used here to document that long-rooted plant species had a competitive advantage at sites subject to warming and that both plant composition and growth were significantly correlated with permafrost thawing and changes in nitrogen availability. Our experiment documents a clear feedback mechanism of climate warming, which releases plant–available N favoring long-rooted plants and explains important changes in plant composition and growth across sites on the Tibetan Plateau.
Vegetation turnover time (τ) is a central ecosystem property to quantify the global vegetation carbon dynamics. However, our understanding of vegetation dynamics is hampered by the lack of long-term observations of the changes in vegetation biomass. Here we challenge the steady state assumption of τ by using annual changes in vegetation biomass that derived from remote-sensing observations. We evaluate the changes in magnitude, spatial patterns, and uncertainties in vegetation carbon turnover times from 1992 to 2016. We found that the forest ecosystem is close to a steady state at global scale, contrasting with the larger differences between τ under steady state and τ under non-steady state at the grid cell level. The observation that terrestrial ecosystems are not in a steady state locally is deemed crucial when studying vegetation dynamics and the potential response of biomass to disturbance and climatic changes.
Graphene or graphene-based nanomaterials have emerged as novel scaffolds for developing robust bio-catalytic systems and a fast-developing promising contender for bioremediation. The interaction of bacteria and graphene is such an elusive issue that its implication in environmental biotechnology is unclear. The complexity and recalcitrant nature of the dyes make the conventional techniques inadequate and remain a challenge for industrial effluent treatment. Many scientists have developed hybrid processes and hybrid materials to enhance the treatment processes to satisfy increasingly stringent laws and criteria related to effluent discharge. The current study explicitly focuses on immobilization and growth of dye-degrading marine bacterial isolates on graphene oxide and their application in methylene blue dye degradation. The synergistic effects of adsorption and biodegradation achieved a unique clean-up performance that the counterpart-free bacteria could not fulfill. Further, toxicity analysis of intermediates also confirmed the non-toxic nature of the intermediates formed after synergistic treatment. This work has the potential to lead to zero effluent treatment processes.