Earthquake swarms commonly occur in upper-crustal hydrothermal-magmatic systems and activate mesh-like fault-fracture networks at zone of fault complexity. How these networks develop through space and time along seismic faults is poorly constrained in the geological record. Here, we describe a spatially dense array of small-displacement (< 1.5 m) epidote-rich fault-veins within granitoids, occurring at the intersections of subsidiary faults with the exhumed seismogenic Bolfin Fault Zone (Atacama Fault System, Northern Chile). Epidote faulting and veining occurred at 3-7 km depth and 200-300 °C ambient temperature. At distance ≤ 1 cm to fault-veins, the magmatic quartz of the wall-rock shows (i) thin (<10- µm-thick) interlaced deformation lamellae, and (ii) crosscutting quartz-healed veinlets. The epidote-rich fault-veins (i) include clasts of deformed magmatic quartz, with deformation lamellae and quartz-healed veinlets, and (ii) record cyclic events of extensional-to-hybrid veining and either aseismic and seismic shearing. Deformation of the wall-rock quartz is interpreted to record the large stress perturbations associated with the rupture propagation of small earthquakes. Instead, dilation and shearing forming the epidote-rich fault-veins are interpreted to record the later development of a mature and hydraulically-connected fault-fracture system. In this latter stage, the fault-fracture system cyclically ruptured due to fluid pressure fluctuations, possibly correlated with swarm-like earthquake sequences.