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The ongoing need for rates: can physiology and omics come together to co-design the measurements needed to understand complex ocean biogeochemistry?
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  • Robert Strzepek,
  • Brook Nunn,
  • Lennart Bach,
  • John Berges,
  • Erica Young,
  • Philip Boyd
Robert Strzepek
University of Tasmania

Corresponding Author:[email protected]

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Brook Nunn
University of Washington
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Lennart Bach
University of Tasmania
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John Berges
University of Wisconsin-Milwaukee
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Erica Young
University of Wisconsin-Milwaukee
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Philip Boyd
University of Tasmania
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Abstract

The necessity to understand the influence of global ocean change on biota has exposed wide-ranging gaps in our knowledge of the fundamental principles that underpin marine life. Concurrently, physiological research has stagnated, in part driven by the advent and rapid evolution of molecular biological techniques, such that they now influence all lines of enquiry in biological and microbial oceanography. This dominance has led to an implicit assumption that physiology is outmoded, and advocacy that ecological and biogeochemical models can be directly informed by omics. However, the main modelling currencies continue to be biological rates and biogeochemical fluxes. Here we ask: how do we translate the wealth of information on physiological potential from omics-based studies to quantifiable physiological rates and, ultimately, to biogeochemical fluxes? Based on the trajectory of the state-of-the-art in biomedical sciences, along with case-studies from ocean sciences, we conclude that it is unlikely that omics can provide such rates in the coming decade. Thus, while physiological rates will continue to be central to providing projections of global change biology, we must revisit the metrics we rely upon. We advocate for the co-design of a new generation of rate measurements that better link the benefits of omics and physiology.