SSR nr. SSR type Locus Region SSR motif size star end Location
1 p5 spacer LSC ATTTT 15 5331 5345 rps16-chlB
2 p1 spacer LSC G 14 7040 7053 chlB-trnQ(UGG)
3 p1 spacer LSC C 11 8373 8383 trnS(GCU)-psaM
4 p1 intron LSC A 12 9401 9412 trnG(UCC)
5 p4 intron LSC AATT 12 9648 9659 trnG(UCC)
6 p1 spacer LSC G 16 13299 13314 atpF-atpH
7 p1 spacer LSC C 12 14280 14291 atpH-atpI
8 p1 spacer LSC C 12 15231 15242 atpI-rps2
9 p1 intron LSC C 10 22475 22484 rpoC1
10 p1 spacer LSC A 11 23468 23478 rpoC1-rpoB
11 p1 spacer LSC C 10 26793 26802 rpoB-trnD(GUC)
12 p4 spacer LSC ATAG 12 27725 27736 rpoB-trnD(GUC)
13 p1 spacer LSC T 13 28419 28431 trnE(UUC)-psbM
14 p4 spacer LSC TGAT 12 28511 28522 trnE(UUC)-psbM
15 p1 spacer LSC A 10 29560 29569 ycf66
16 p1 spacer LSC G 14 29640 29653 ycf66
17 p1 spacer LSC G 10 31641 31650 trnC(GCA)-trnG(GCC)
18 p1 spacer LSC A 10 31715 31724 trnC(GCA)-trnG(GCC)
19 p1 spacer LSC C 10 32102 32111 trnG(GCC)-psbZ
20 p4 spacer LSC TATC 16 33543 33558 trnS(UGA)-psbC
21 p4 spacer LSC ATAG 12 33562 33573 trnS(UGA)-psbC
22 p1 spacer LSC A 10 37593 37602 psbD-trnT(GGU)
23 p1 intron LSC A 11 44104 44114 ycf3
24 p1 intron LSC T 13 44123 44135 ycf3
25 p1 intron LSC C 11 45216 45226 ycf3
26 p1 spacer LSC T 10 45601 45610 ycf3-trnS(GGA)
27 p1 spacer LSC G 10 47798 47807 rps4-trnL(CAA)
28 p1 spacer LSC A 10 51902 51911 trnV(UAC)-trnM(CAU)
29 p1 spacer LSC T 11 56710 56720 trnR(UCG)-accD
30 p4 spacer LSC TATT 12 57765 57776 accD-psaI
31 p2 spacer LSC AT 18 58231 58248 accD-psaI
32 p2 spacer LSC TA 12 62570 62581 petA-psbJ
33 p1 spacer LSC A 10 68052 68061 rpl20-rps12
34 p1 spacer LSC T 11 68120 68130 rpl20-rps12
35 p4 spacer LSC GATA 12 69048 69059 rps12-clpP
36 p1 intron LSC C 11 69574 69584 chlP
37 p1 intron LSC T 11 69615 69625 chlP
38 p1 intron LSC T 11 70413 70423 chlP
39 p2 intron LSC CT 12 70704 70715 chlP
40 p2 spacer LSC AT 12 79990 80001 rps8-rpl14
41 p1 intron LSC T 12 81564 81575 rpl16
42 p1 spacer LSC T 10 85769 85778 rpl23-trnI(CAU)
43 p2 spacer IRA AT 12 87653 87664 trnT(UGU)
44 p4 spacer IRA TCTT 12 96474 96485 rrn16-rps12
45 p1 spacer IRA A 12 97573 97584 rrn16-rps12
46 p1 spacer SSC A 10 111684 111693 ndhF-rpl21
47 p3 spacer SSC AAT 12 112846 112857 rpl32-trnP(GGG)
48 p2 spacer SSC TA 12 112860 112871 rpl32-trnP(GGG)
49 p3 spacer SSC TAT 12 112873 112884 rpl32-trnP(GGG)
50 p1 spacer SSC A 10 113225 113234 trnP(GGG)-trnL(UAG)
51 p1 spacer SSC T 11 113467 113477 trnL(UAG)-ccsA
52 p1 spacer SSC A 10 116602 116611 ndhD-psaC
53 p4 spacer SSC AATT 12 116610 116621 ndhD-psaC
54 p1 spacer SSC G 11 117154 117164 psaC-ndhE
55 p1 spacer SSC T 11 118927 118937 ndhI-ndhA
56 p2 spacer SSC AT 16 118966 118981 ndhI-ndhA
57 p1 intron SSC T 17 120503 120519 ndhA
58 p1 spacer SSC A 10 122795 122804 rps15-ycf1
59 p1 spacer IRB T 12 142438 142449 rps12-rrn16
60 p4 spacer IRB AAAG 12 143536 143547 rps12-rrn16
61 p2 spacer IRB AT 12 152358 152369 trnT(UGU)