SSR nr. SSR type Locus Region SSR motif size star end Location
1 p1 spacer LSC A 13 3514 3526 matK-rps16
2 p1 spacer LSC T 10 3613 3622 matK-rps16
3 p2 spacer LSC TA 16 7615 7630 psbK-psbI
4 p1 spacer LSC C 14 8229 8242 trnS(GCU)-psaM
5 p1 spacer LSC A 22 8332 8353 trnS(GCU)-psaM
6 p1 spacer LSC T 11 8370 8380 trnS(GCU)-psaM
7 p1 intron LSC A 10 9507 9516 ycf12
8 p1 intron LSC T 12 9648 9659 ycf12
9 p1 spacer LSC C 38 13308 13345 atpF-atpH
10 p1 spacer LSC T 12 15193 15204 atpI-rps2
11 p1 intron LSC C 10 22421 22430 rpoC1
12 p1 spacer LSC A 12 23409 23420 rpoC1-rpoB
13 p1 spacer LSC T 14 27774 27787 rpoB-trnD(GUC)
14 p1 spacer LSC A 14 28387 28400 trnE(UUC)-psbM
15 p1 spacer LSC T 21 28425 28445 trnE(UUC)-psbM
16 p1 spacer LSC A 12 29887 29898 ycf66
17 p1 spacer LSC T 10 30334 30343 petN-trnC(GCA)
18 p1 spacer LSC A 15 30525 30539 petN-trnC(GCA)
19 p1 spacer LSC T 10 30938 30947 trnC(GCA)-trnG(GCC)
20 p1 spacer LSC T 12 32361 32372 trnG(GCC)-psbZ
21 p1 spacer LSC T 10 33284 33293 trnS(UGA)-psbC
22 p4 spacer LSC TATC 16 33813 33828 trnS(UGA)-psbC
23 p4 spacer LSC ATAG 12 33832 33843 trnS(UGA)-psbC
24 p1 spacer LSC T 16 37027 37042 psbD-trnT(GGU)
25 p1 spacer LSC A 13 37070 37082 psbD-trnT(GGU)
26 p1 spacer LSC T 19 37491 37509 psbD-trnT(GGU)
27 p1 spacer LSC T 12 37753 37764 psbD-trnT(GGU)
28 p2 spacer LSC TA 16 38517 38532 trnfM-rps14
29 p1 spacer LSC T 10 38541 38550 trnfM-rps14
30 p1 intron LSC T 13 44335 44347 ycf3
31 p1 intron LSC C 10 45444 45453 ycf3
32 p1 spacer LSC T 12 45838 45849 ycf3-trnS(GGA)
33 p1 spacer LSC T 12 46134 46145 ycf3-trnS(GGA)
34 p1 spacer LSC T 11 46434 46444 trnS(GGA)-rps4
35 p1 intron LSC A 10 48446 48455 trnL(CAA)
36 p2 spacer LSC TA 14 48820 48833 trnL(CAA)-trnF(GAA)
37 p1 spacer LSC T 10 51310 51319 ndhC-trnV(UAC)
38 p1 spacer LSC A 14 52158 52171 trnV(UAC)-trnM(CAU)
39 p1 spacer LSC T 11 54626 54636 atpB-rbcL
40 p1 spacer LSC T 13 56570 56582 rbcL-trnR(UCG)
41 p1 spacer LSC T 13 56989 57001 trnR(UCG)-accD
42 p1 spacer LSC A 10 58098 58107 accD_psaI
43 p1 spacer LSC T 12 58522 58533 accD_psaI
44 p1 spacer LSC A 11 59707 59717 ycf4-cemA
45 p1 spacer LSC A 10 62694 62703 petA-psbJ
46 p1 spacer LSC T 14 63180 63193 petA-psbJ
47 p1 spacer LSC T 10 64840 64849 psbE-petL
48 p1 spacer LSC A 10 65211 65220 petL-petG
49 p1 spacer LSC C 12 66700 66711 psaJ-rpl33
50 p1 spacer LSC A 12 67888 67899 rpl20-rps12
51 p1 spacer LSC T 13 68130 68142 rpl20-rps12
52 p1 spacer LSC A 10 68290 68299 rpl20-rps12
53 p1 spacer LSC T 11 68557 68567 rpl20-rps12
54 p4 spacer LSC TTAT 12 69379 69390 rps12-clpP
55 p1 intron LSC C 10 70697 70706 clpP
56 p1 spacer LSC A 13 71660 71672 clpP-psbB
57 p1 spacer LSC T 10 71754 71763 clpP-psbB
58 p1 spacer LSC A 13 73543 73555 psbB-psbT
59 p1 spacer LSC A 10 74268 74277 psbH-petB
60 p1 spacer LSC T 13 77480 77492 petD-rpoA
61 p2 spacer LSC AT 20 80238 80257 rps8-rpl14
62 p2 spacer LSC AT 16 80338 80353 rps8-rpl14
63 p1 spacer LSC A 13 81186 81198 rpl14-rpl16
64 p1 intron LSC T 12 81919 81930 rpl16
65 p1 intron LSC T 12 82262 82273 rpl16
66 p1 spacer LSC T 11 82483 82493 rpl16-rps3
67 p1 intron LSC T 15 84995 85009 rpl2
68 p1 spacer LSC A 11 85683 85693 rpl2-rpl23
69 p1 spacer LSC T 12 85991 86002 rpl23-trnI(CAU)
70 p1 spacer LSC T 16 86136 86151 rpl23-trnI(CAU)
71 p4 gene IRB CTAC 12 91392 91403 rrn23
72 p2 intron IRB AG 14 94391 94404 trnI(GAU)
73 p4 spacer IRB TCTT 12 97681 97692 rrn16-rps12
74 p1 spacer IRB T 13 98774 98786 rrn16-rps12
75 p1 spacer IRB A 12 102750 102761 trnH(GUG)-ycf2
76 p4 CDS IRB TTTA 12 104706 104717 ycf2
77 p4 CDS IRB AGAA 12 107950 107961 ycf2
78 p1 spacer IRB A 15 109364 109378 ycf2-trnN(GUU)
79 p1 spacer SSC T 13 110416 110428 ycf2-trnN(GUU)
80 p1 spacer SSC A 11 112695 112705 ndhF-rpl21
81 p2 spacer SSC AT 18 113419 113436 rpl21-rpl32
82 p1 spacer SSC A 11 113761 113771 rpl32-trnP(GGG)
83 p1 spacer SSC T 13 114080 114092 rpl32-trnP(GGG)
84 p1 spacer SSC T 12 119615 119626 trnP(GGG)-trnL(UAG)
85 p1 spacer SSC A 10 119831 119840 trnL(UAG)-ccsA
86 p2 spacer SSC AT 16 119920 119935 trnL(UAG)-ccsA
87 p1 spacer SSC A 11 121168 121178 ccsA-ndhD
88 p1 spacer SSC A 14 121427 121440 ccsA-ndhD
89 p1 spacer SSC A 28 123088 123115 ndhD-psaC
90 p2 spacer SSC CT 12 124783 124794 ndhG-ndhI
91 p2 intron SSC TA 12 126492 126503 ndhA
92 p1 intron SSC T 13 127011 127023 ndhA
93 p1 spacer SSC A 10 129309 129318 rps15-ycf1
94 p1 spacer SSC A 10 129333 129342 rps15-ycf1
95 p1 spacer IRA T 15 139188 139202 trnN(GUU)-ycf2
96 p4 CDS IRA TTTC 12 140604 140615 ycf2
97 p4 CDS IRA TAAA 12 143849 143860 ycf2
98 p1 spacer IRA T 12 145805 145816 ycf2-trnH(GUG)
99 p1 spacer IRA A 13 149780 149792 rps12-rrn16
100 p4 spacer IRA AAAG 12 150873 150884 rps12-rrn16
101 p2 intron IRA TC 14 154161 154174 trnI(GAU)
102 p4 gene IRA AGGT 12 157161 157172 rrn23